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A horizon-vertical dimension reduction method for classification of cancer cell gene in a fuzzy neural network
Zhang T.2; Chen C.L.P.2
2013
Conference NameInternational Conference on Fuzzy Theory and Its Applications (iFUZZY)
Source PublicationiFUZZY 2013 - 2013 International Conference on Fuzzy Theory and Its Applications
Pages49-54
Conference DateDEC 06-08, 2013
Conference PlaceTaipei, TAIWAN
Abstract

Because gene expression profiles in normal cells are different from those of cancer cells, experimental results of the tests can diagnose a cancerous person. However, the gene data are usually with high variable dependent, high dimensional, and very noisy. It is not appropriate to use the original data to train or to test the forecasting model. Depending on the unique properties of the genes expression data, a new statistical dimension reduction method called horizon-vertical dimension reduction method (HVDRM) is developed in this paper. The feature set dimension is reduced from 2000 to 5 by applying HVDRM. Then, the extracted feature set is arranged to train in an artificial neural network (ANN) and a fuzzy neural network (FNN). Keep these two trained models, which is then send to the classification system to examine whether the testing sample is normal or not. Three kinds of experiments are conducted to test the validity, namely, original data for an ANN, reduction feature data for an ANN, and reduced feature data for a FNN. It is found that the testing accuracy of the FNN has the best result. It is concluded that the proposed HVDRM is an effective method to extract feature data and the FNN is more suitable than ANN in the given cancer cell gene detection as the forecasting model.

KeywordDimension Reduction Fuzzy Neural Network Horizon-vertical Dimension Reduction Method Cancer Detection Classification
DOI10.1109/iFuzzy.2013.6825408
URLView the original
Indexed ByCPCI-S
Language英語English
WOS Research AreaComputer Science
WOS SubjectComputer Science, Artificial Intelligence ; Computer Science, Interdisciplinary Applications
WOS IDWOS:000339736400009
Scopus ID2-s2.0-84903649411
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Citation statistics
Document TypeConference paper
CollectionDEPARTMENT OF COMPUTER AND INFORMATION SCIENCE
Corresponding AuthorZhang T.
Affiliation1.Department of Computer and Information science, University of Macau
2.University of Macau, Taipa, Macau, MO
First Author AffilicationUniversity of Macau
Corresponding Author AffilicationUniversity of Macau
Recommended Citation
GB/T 7714
Zhang T.,Chen C.L.P.. A horizon-vertical dimension reduction method for classification of cancer cell gene in a fuzzy neural network[C], 2013, 49-54.
APA Zhang T.., & Chen C.L.P. (2013). A horizon-vertical dimension reduction method for classification of cancer cell gene in a fuzzy neural network. iFUZZY 2013 - 2013 International Conference on Fuzzy Theory and Its Applications, 49-54.
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