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Computational and experimental insights on the interaction of artemisinin, dihydroartemisinin and chloroquine with SARS-CoV-2 spike protein receptor-binding domain (RBD)
Ribaudo, Giovanni1; Coghi, Paolo2,3; Yang, Li Jun4; Ng, Jerome P.L.4; Mastinu, Andrea1; Memo, Maurizio1; Wong, Vincent Kam Wai4; Gianoncelli, Alessandra1
2021-05-12
Source PublicationNatural Product Research
ISSN1478-6419
Volume36Issue:20Pages:5358-5363
Abstract

The mechanism of host cell invasion of severe acute respiratory syndrome coronavirus-2 SARS-CoV-2 is connected with the interaction of spike protein (S) with angiotensin-converting enzyme 2 (ACE2) through receptor-binding domain (RBD). Small molecules targeting this assembly are being investigated as drug candidates to contrast SARS-CoV-2. In this context, chloroquine, an antimalarial agent proposed as a repurposed drug to treat coronavirus disease-19 (COVID-19), was hypothesized to bind RBD among its other mechanisms. Similarly, artemisinin and its derivatives are being studied as potential antiviral agents. In this work, we investigated the interaction of artemisinin, its metabolite dihydroartemisinin and chloroquine with RBD by means of computational tools and in vitro. Docking studies showed that the compounds interfere with the same region of the protein and molecular dynamics (MD) simulations demonstrated the stability of the predicted complexes. Bio-layer interferometry showed that chloroquine dose-dependently binds RBD (KD = 35.9 µM) more efficiently than artemisinins. (Figure presented.).

KeywordArtemisinin Bio-layer Interferometry Molecular Dynamics Sars-cov-2 Spike Protein
DOI10.1080/14786419.2021.1925894
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaChemistry ; Pharmacology & Pharmacy
WOS SubjectChemistry, Applied ; Chemistry, Medicinal
WOS IDWOS:000649613000001
Scopus ID2-s2.0-85106342405
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Document TypeJournal article
CollectionUniversity of Macau
Corresponding AuthorRibaudo, Giovanni
Affiliation1.Department of Molecular and Translational Medicine, University of Brescia, Brescia, Italy
2.School of Pharmacy, Macau University of Science and Technology, Taipa, Macao
3.State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Taipa, Macao
4.Neher’s Biophysics Laboratory for Innovative Drug Discovery, State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Taipa, Macao
Recommended Citation
GB/T 7714
Ribaudo, Giovanni,Coghi, Paolo,Yang, Li Jun,et al. Computational and experimental insights on the interaction of artemisinin, dihydroartemisinin and chloroquine with SARS-CoV-2 spike protein receptor-binding domain (RBD)[J]. Natural Product Research, 2021, 36(20), 5358-5363.
APA Ribaudo, Giovanni., Coghi, Paolo., Yang, Li Jun., Ng, Jerome P.L.., Mastinu, Andrea., Memo, Maurizio., Wong, Vincent Kam Wai., & Gianoncelli, Alessandra (2021). Computational and experimental insights on the interaction of artemisinin, dihydroartemisinin and chloroquine with SARS-CoV-2 spike protein receptor-binding domain (RBD). Natural Product Research, 36(20), 5358-5363.
MLA Ribaudo, Giovanni,et al."Computational and experimental insights on the interaction of artemisinin, dihydroartemisinin and chloroquine with SARS-CoV-2 spike protein receptor-binding domain (RBD)".Natural Product Research 36.20(2021):5358-5363.
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