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Identification of bladder cancer prognostic biomarkers using an ageing gene-related competitive endogenous RNA network
Wang, Changliang; Chen, Liang; Yang, Yang; Zhang, Menglei; Wong, Garry
2017-12-19
Source PublicationONCOTARGET
ISSN1949-2553
Volume8Issue:67Pages:111742-111753
Abstract

Competitive endogenous RNAs (ceRNAs) are a newly proposed RNA interaction mechanism that has been associated with the initiation and progression of various cancers. In this study, we constructed an ageing gene related ceRNA network (AgeingCeNet) in bladder cancer. Network analysis revealed that ageing gene ceRNAs have a larger degree and closeness centrality than ageing genes themselves. Notably, the difference of betweenness centrality of ageing genes and their ceRNAs is not significant, suggesting that the ceRNAs of ageing genes and ageing genes themselves both play important communication roles in AgeingCeNet. KEGG pathway enrichment analysis for genes in AgeingCeNet revealed that AgeingCeNet genes are enriched in cancer pathways and several cancer related singaling pathways. We also identified 37 core modules from AgeingCeNet using CFinder software. Next, we identified 2 potential prognostic modules, named K11M14 and K13M4, whose prognostic ability is better than that of age and gender. Finally, we identified microRNAs (miRNAs) regulating the two modules, which include miR-15b-5p, miR-195-5p, miR-30 family members, and several other cancer-related miRNAs. Our study demonstrated that constructing an ageing gene related ceRNA network is a feasible strategy to explore the mechanism of initiation and progression of bladder cancer, which might benefit the treatment of this disease.

KeywordAgeing Gene Bladder Cancer Microrna Competitive Endogenous Rna Prognostic Biomarker
DOI10.18632/oncotarget.22905
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaOncology ; Cell Biology
WOS SubjectOncology ; Cell Biology
WOS IDWOS:000419567000081
PublisherIMPACT JOURNALS LLC
The Source to ArticleWOS
Scopus ID2-s2.0-85038445877
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionFaculty of Health Sciences
Corresponding AuthorWong, Garry
AffiliationFaculty of Health Sciences, University of Macau, Macau, China
First Author AffilicationFaculty of Health Sciences
Corresponding Author AffilicationFaculty of Health Sciences
Recommended Citation
GB/T 7714
Wang, Changliang,Chen, Liang,Yang, Yang,et al. Identification of bladder cancer prognostic biomarkers using an ageing gene-related competitive endogenous RNA network[J]. ONCOTARGET, 2017, 8(67), 111742-111753.
APA Wang, Changliang., Chen, Liang., Yang, Yang., Zhang, Menglei., & Wong, Garry (2017). Identification of bladder cancer prognostic biomarkers using an ageing gene-related competitive endogenous RNA network. ONCOTARGET, 8(67), 111742-111753.
MLA Wang, Changliang,et al."Identification of bladder cancer prognostic biomarkers using an ageing gene-related competitive endogenous RNA network".ONCOTARGET 8.67(2017):111742-111753.
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