Residential College | false |
Status | 已發表Published |
An effective strategy for identifying autogenous regulation of transcription factors in filamentous fungi | |
Qin, Longguang1; Guo, Shuhui1; Li, Ang1; Fan, Lu1; Tan, Kaeling1,2; Wong, Koon Ho1,3,4 | |
2023-11-06 | |
Source Publication | Microbiology spectrum |
ISSN | 2165-0497 |
Volume | 11Issue:6Pages:e02347-23 |
Abstract | Transcription factors (TFs) play a crucial role in regulating gene expression in living organisms, and any malfunction in their functions can lead to severe physiological consequences. The regulation of TFs occurs at multiple levels, with autogenous regulation being a common mode of regulation where the expression of a TF gene is dependent on its own function. Although bioinformatics analysis of promoter sequences is frequently used to predict autogenous regulation events, it is not entirely reliable. In this study, we present a simple yet effective strategy to identify the autogenous regulation of a TF. We have demonstrated the effectiveness of this method on three fungal TFs (the Carbon Catabolite Repressor CreA and two uncharacterized TFs of secondary metabolism) and have generated a set of plasmids to facilitate the construction of experimental strains in fungi. Our method can be applied to both positive and negative-acting TFs and generalized for other organisms. Hence, this work provides a reliable and straightforward method for identifying autogenous regulation events, which is useful for understanding TFs’ functions. |
Keyword | Autogenous Regulation Gene Regulation Transcription Factors |
DOI | 10.1128/spectrum.02347-23 |
URL | View the original |
Indexed By | SCIE |
Language | 英語English |
WOS Research Area | Microbiology |
WOS Subject | Microbiology |
WOS ID | WOS:001095469800001 |
Publisher | AMER SOC MICROBIOLOGY, 1752 N ST NW, WASHINGTON, DC 20036-2904 |
Scopus ID | 2-s2.0-85180007572 |
Fulltext Access | |
Citation statistics | |
Document Type | Journal article |
Collection | Ministry of Education Frontiers Science Center for Precision Oncology, University of Macau Faculty of Health Sciences Institute of Translational Medicine Genomics, Bioinformatics and Single Cell Analysis Core |
Corresponding Author | Wong, Koon Ho |
Affiliation | 1.Faculty of Health Sciences, University of Macau, Avenida da Universidade , Taipa, Macau, China 2.Gene Expression, Genomics and Bioinformatics core, Faculty of Health Sciences, University of Macau, Avenida da Universidade , Taipa, Macau, China 3.Institute of Translational Medicine, Faculty of Health Sciences, University of Macau, Avenida da Universidade , Taipa, Macau, China 4.MoE Frontiers Science Center for Precision Oncology, University of Macau , Taipa, Macau, China |
First Author Affilication | Faculty of Health Sciences |
Corresponding Author Affilication | Faculty of Health Sciences; University of Macau |
Recommended Citation GB/T 7714 | Qin, Longguang,Guo, Shuhui,Li, Ang,et al. An effective strategy for identifying autogenous regulation of transcription factors in filamentous fungi[J]. Microbiology spectrum, 2023, 11(6), e02347-23. |
APA | Qin, Longguang., Guo, Shuhui., Li, Ang., Fan, Lu., Tan, Kaeling., & Wong, Koon Ho (2023). An effective strategy for identifying autogenous regulation of transcription factors in filamentous fungi. Microbiology spectrum, 11(6), e02347-23. |
MLA | Qin, Longguang,et al."An effective strategy for identifying autogenous regulation of transcription factors in filamentous fungi".Microbiology spectrum 11.6(2023):e02347-23. |
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