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Unsupervised Color-Based Nuclei Segmentation in Histopathology Images with Various Color Spaces and K Values Selection
Zhang, Qi1; Ying, Zuobin1; Shen, Jian2; Kou, Seng Ka2; Sun, Jingzhang3; Zhang, Bob4
2024
Source PublicationInternational Journal of Image and Graphics
ISSN0219-4678
Pages2550061
Abstract

The development of digital pathology offers a significant opportunity to evaluate and analyze the whole slides of disease tissue effectively. In particular, the segmentation of nuclei from histopathology images plays an important role in quantitatively measuring and evaluating the acquired diseased tissue. There are many automatic methods to segment cell nuclei in histopathology images. One widely used unsupervised segmentation approach is based on standard k-means or fuzzy c-means (FCM) to process the color histopathology images to segment cell nuclei. Compared with the supervised learning method, this approach can obtain segmented nuclei without annotated nuclei labels for training, which saves a lot of labeling and training time. The color space and k value among this method plays a crucial role in determining the nuclei segmentation performance. However, few works have investigated various color spaces and k value selection simultaneously in unsupervised color-based nuclei segmentation with k-means or FCM algorithms. In this study, we will present color-based nuclei segmentation methods with standard k-means and FCM algorithms for histopathology images. Several color spaces of Haematoxylin and Eosin (H&E) stained histopathology data and various k values among k-means and FCM are investigated correspondingly to explore the suitable selection for nuclei segmentation. A comprehensive nuclei dataset with 7 different organs is used to validate our proposed method. Related experimental results indicate that Lab and the YCbCr color spaces with a k of 4 are more reasonable for nuclei segmentation via k-means, while the Lab color space with k of 4 is useful via FCM.

KeywordColor Space Fuzzy C-means Histopathology K-means Nuclei Segmentation
DOI10.1142/S0219467825500615
URLView the original
Indexed ByESCI
Language英語English
WOS Research AreaComputer Science
WOS SubjectComputer Science, Software Engineering
WOS IDWOS:001186109300001
PublisherWORLD SCIENTIFIC PUBL CO PTE LTD, 5 TOH TUCK LINK, SINGAPORE 596224, SINGAPORE
Scopus ID2-s2.0-85188178441
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionDEPARTMENT OF COMPUTER AND INFORMATION SCIENCE
Corresponding AuthorZhang, Bob
Affiliation1.Faculty of Data Science, City University of Macau, Macao
2.Kiang Wu Hospital, Macao
3.School of Cyberspace Security, Hainan University, Haikou, Hainan, China
4.PAMI Research Group, Dept. of Computer and Information Science, University of Macau, Macao
First Author AffilicationUniversity of Macau
Corresponding Author AffilicationUniversity of Macau
Recommended Citation
GB/T 7714
Zhang, Qi,Ying, Zuobin,Shen, Jian,et al. Unsupervised Color-Based Nuclei Segmentation in Histopathology Images with Various Color Spaces and K Values Selection[J]. International Journal of Image and Graphics, 2024, 2550061.
APA Zhang, Qi., Ying, Zuobin., Shen, Jian., Kou, Seng Ka., Sun, Jingzhang., & Zhang, Bob (2024). Unsupervised Color-Based Nuclei Segmentation in Histopathology Images with Various Color Spaces and K Values Selection. International Journal of Image and Graphics, 2550061.
MLA Zhang, Qi,et al."Unsupervised Color-Based Nuclei Segmentation in Histopathology Images with Various Color Spaces and K Values Selection".International Journal of Image and Graphics (2024):2550061.
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