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Machine learning model reveals the role of angiogenesis and EMT genes in glioma patient prognosis and immunotherapy
Feng, Suyin1,2,3,4,5; Zhu, Long2,4,5; Qin, Yan6; Kou, Kun2; Liu, Yongtai2; Zhang, Guangmin2; Wang, Ziheng7,8; Lu, Hua1; Sun, Runfeng4,5
2024-11-12
Source PublicationBiology direct
ISSN1745-6150
Volume19Issue:1Pages:113
Abstract

Gliomas represent a highly aggressive class of tumors located in the brain. Despite the availability of multiple treatment modalities, the prognosis for patients diagnosed with glioma remains unfavorable. Therefore, further exploration of new biomarkers is crucial to enhance the prognostic assessment of glioma and to investigate more effective treatment options. In this research, we utilized multiple machine learning techniques to assess the significance of genes related to angiogenesis and epithelial-mesenchymal transition (EMT) in the context of prognosis and treatment for glioma patients. The random forest algorithm highlighted the significance of CALU, and further analysis indicated that the effect of CALU on glioma progression may be regulated by MYC. Different machine learning approaches were employed in our investigation to uncover crucial genes associated with angiogenesis and EMT in glioma. Our findings verify the connection between these genes and the prognosis of patients with glioma, as well as the results of immunotherapeutic interventions. Notably, through experimental verification, we identified CALU as a new prognostic marker for glioma, and inhibiting the expression of CALU can impede the progression of glioma.

KeywordGliomas Angiogenesis Epithelial-mesenchymal Transition Calu
DOI10.1186/s13062-024-00565-z
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaLife Sciences & Biomedicine - Other Topics
WOS SubjectBiology
WOS IDWOS:001353337600002
PublisherBMC, CAMPUS, 4 CRINAN ST, LONDON N1 9XW, ENGLAND
Scopus ID2-s2.0-85209350474
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionMinistry of Education Frontiers Science Center for Precision Oncology, University of Macau
Corresponding AuthorWang, Ziheng; Lu, Hua; Sun, Runfeng
Affiliation1.Department of Neurosurgery, Affiliated Hospital of Jiangnan University, Wuxi, Jiangsu 214062, China
2.Department of Neurosurgery, Donghai County People’s Hospital, Lianyungang, Jiangsu 222000, China
3.Neuroscience Center, Wuxi School of Medicine, Jiangnan University, Wuxi, Jiangsu 214122, China
4.Donghai County People’s Hospital - Jiangnan University Smart Healthcare Joint Laboratory, Donghai County People’s Hospital, Lianyungang, Jiangsu 222000, China
5.Cardio-Cerebral Vascular Disease Prevention and Treatment Innovation Center, Donghai County People’s Hospital, Lianyungang, Jiangsu 222000, China
6.Department of Pathology, Affiliated Hospital of Jiangnan University, Wuxi, China
7.The School of Public Health and Preventive Medicine, Monash University, Melbourne, VIC, Australia
8.MOE Frontier Science Centre for Precision Oncology, University of Macau, Macau SAR 999078, China
Corresponding Author AffilicationUniversity of Macau
Recommended Citation
GB/T 7714
Feng, Suyin,Zhu, Long,Qin, Yan,et al. Machine learning model reveals the role of angiogenesis and EMT genes in glioma patient prognosis and immunotherapy[J]. Biology direct, 2024, 19(1), 113.
APA Feng, Suyin., Zhu, Long., Qin, Yan., Kou, Kun., Liu, Yongtai., Zhang, Guangmin., Wang, Ziheng., Lu, Hua., & Sun, Runfeng (2024). Machine learning model reveals the role of angiogenesis and EMT genes in glioma patient prognosis and immunotherapy. Biology direct, 19(1), 113.
MLA Feng, Suyin,et al."Machine learning model reveals the role of angiogenesis and EMT genes in glioma patient prognosis and immunotherapy".Biology direct 19.1(2024):113.
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