| Residential College | false |
| Status | 已發表Published |
| An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species | |
Zhang,Peijun1,4; Zhao,Yong2; Li,Chang2,8; Lin,Mingli1; Dong,Lijun1; Zhang,Rui2; Liu,Mingzhong1; Li,Kuan1; Zhang,He2,20; Liu,Xiaochuan2; Zhang,Yaolei2,21; Yuan,Yuan1,11; Liu,Huan3; Seim,Inge9,10; Sun,Shuai2; Du,Xiao2; Chang,Yue2; Li,Feida3; Liu,Shanshan2; Lee,Simon Ming Yuen5 ; Wang,Kun11; Wang,Ding12; Wang,Xianyan13; McGowen,Michael R.14; Jefferson,Thomas A.15; Olsen,Morten Tange16; Stiller,Josefin4; Zhang,Guojie4,6,19; Xu,Xun2,3; Yang,Huanming3,6; Fan,Guangyi2,5 ; Liu,Xin2,3,7,18; Li,Songhai1,17,22
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| 2020-10-23 | |
| Source Publication | iScience
 |
| ISSN | 2589-0042 |
| Volume | 23Issue:10Pages:101640 |
| Other Abstract | The Indo-Pacific humpback dolphin (Sousa chinensis) is a small inshore species of odontocete cetacean listed as Vulnerable on the IUCN Red List. Here, we report on the evolution of S. chinensis chromosomes from its cetruminant ancestor and elucidate the evolutionary history and population genetics of two neighboring S. chinensis populations. We found that breakpoints in ancestral chromosomes leading to S. chinensis could have affected the function of genes related to kidney filtration, body development, and immunity. Resequencing of individuals from two neighboring populations in the northwestern South China Sea, Leizhou Bay and Sanniang Bay, revealed genetic differentiation, low diversity, and small contemporary effective population sizes. Demographic analyses showed a marked decrease in the population size of the two investigated populations over the last ~4,000 years, possibly related to climatic oscillations. This study implies a high risk of extinction and strong conservation requirement for the Indo-Pacific humpback dolphin. |
| Keyword | Evolutionary Biology Genetics Genomics |
| DOI | 10.1016/j.isci.2020.101640 |
| URL | View the original |
| Indexed By | SCIE |
| Language | 英語English |
| WOS Research Area | Science & Technology - Other Topics |
| WOS Subject | Multidisciplinary Sciences |
| WOS ID | WOS:000581985500093 |
| Publisher | CELL PRESS, 50 HAMPSHIRE ST, FLOOR 5, CAMBRIDGE, MA 02139 |
| Scopus ID | 2-s2.0-85092632069 |
| Fulltext Access | |
| Citation statistics | |
| Document Type | Journal article |
| Collection | DEPARTMENT OF PHARMACEUTICAL SCIENCES Institute of Chinese Medical Sciences THE STATE KEY LABORATORY OF QUALITY RESEARCH IN CHINESE MEDICINE (UNIVERSITY OF MACAU) |
| Co-First Author | Zhang,Peijun; Zhao,Yong |
| Corresponding Author | Fan,Guangyi; Liu,Xin; Li,Songhai |
| Affiliation | 1.Marine Mammal and Marine Bioacoustics Laboratory,Institute of Deep-sea Science and Engineering,Chinese Academy of Sciences,Sanya,572000,China 2.BGI-Qingdao,BGI-Shenzhen,Qingdao,266555,China 3.BGI-Shenzhen,Shenzhen,518083,China 4.Section for Ecology and Evolution,Department of Biology,University of Copenhagen,Copenhagen,2100,Denmark 5.State Key Laboratory of Quality Research in Chinese Medicine,Institute of Chinese Medical Sciences,University of Macau,Macao,999078,Macao 6.China National GeneBank,BGI-Shenzhen,Shenzhen,518120,China 7.BGI-Fuyang,BGI-Shenzhen,Fuyang,236009,China 8.BGI Education Center,University of Chinese Academy of Sciences,Shenzhen,518083,China 9.Integrative Biology Laboratory,College of Life Sciences,Nanjing Normal University,Nanjing,210023,China 10.Comparative and Endocrine Biology Laboratory,Translational Research Institute-Institute of Health and Biomedical Innovation,School of Biomedical Sciences,Queensland University of Technology,Brisbane,4102,Australia 11.Center for Ecological and Environmental Sciences,Northwestern Polytechnical University,Xi'an,710072,China 12.Key Laboratory of Aquatic Biodiversity and Conservation of Chinese Academy of Sciences,Institute of Hydrobiology,Chinese Academy of Sciences,Wuhan,430072,China 13.Third Institute of Oceanography,Ministry of Natural Resources,Xiamen,361005,China 14.Department of Vertebrate Zoology,Smithsonian National Museum of Natural History,Washington DC,20560,United States 15.Clymene Enterprises,Yerba Valley Way,Lakeside,92040,United States 16.Evolutionary Genomics Section,Globe Institute,University of Copenhagen,Copenhagen,Øster Farimagsgade 5,1353,Denmark 17.Function Laboratory for Marine Fisheries Science and Food Production Processes,Qingdao National Laboratory for Marine Science and Technology,Qingdao,266237,China 18.State Key Laboratory of Agricultural Genomics,BGI-Shenzhen,Shenzhen,518083,China 19.State Key Laboratory of Genetic Resources and Evolution,Kunming Institute of Zoology,Chinese Academy of Sciences,Kunming,650223,China 20.Department of Biology,Hong Kong Baptist University,Hong Kong,Hong Kong 21.Department of Biotechnology and Biomedicine,Technical University of Denmark,Lyngby,2800,Denmark 22.Tropical Marine Science Institute,National University of Singapore,Singapore,119227,Singapore |
| Corresponding Author Affilication | Institute of Chinese Medical Sciences |
| Recommended Citation GB/T 7714 | Zhang,Peijun,Zhao,Yong,Li,Chang,et al. An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species[J]. iScience, 2020, 23(10), 101640. |
| APA | Zhang,Peijun., Zhao,Yong., Li,Chang., Lin,Mingli., Dong,Lijun., Zhang,Rui., Liu,Mingzhong., Li,Kuan., Zhang,He., Liu,Xiaochuan., Zhang,Yaolei., Yuan,Yuan., Liu,Huan., Seim,Inge., Sun,Shuai., Du,Xiao., Chang,Yue., Li,Feida., Liu,Shanshan., ...& Li,Songhai (2020). An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species. iScience, 23(10), 101640. |
| MLA | Zhang,Peijun,et al."An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species".iScience 23.10(2020):101640. |
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