Residential College | false |
Status | 已發表Published |
Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel | |
Li,Fei Na1; Jiang,Zhong Ke1; Liu,Shao Wei1; Tuo,Li2; Lee,Simon Ming Yuen3; Sun,Cheng Hang1 | |
2019-05-01 | |
Source Publication | International Journal of Systematic and Evolutionary Microbiology |
ISSN | 1466-5026 |
Volume | 69Issue:5Pages:1343-1349 |
Abstract | A Gram-stain-positive, aerobic, motile, non-spore-forming and rod-shaped actinobacterium, designated strain 4Q3S-7, was isolated from a piece of surface-sterilized bark of Kandelia candel collected at the Cotai Ecological Zone in Macao, China. Colonies were yellowish white, circular, smooth and convex. The 16S rRNA gene sequence of strain 4Q3S-7 exhibited highest similarities to Marmoricola ginsengisoli Gsoil 097 (97.6%), Marmoricola solisilvae KIS18-7 (97.6%) and Marmoricola pocheonensis Gsoil 818 (97.3145). Phylogenetic analysis showed that strain 4Q3S-7 clustered with species of the genus Marmoricola and was clearly affiliated to the genus Marmoricola. Genomic analyses, including average nucleotide identity and DNA-DNA hybridization, clearly separated strain 4Q3S-7 from M. ginsengisoli Gsoil 097, M. solisilvae KIS18-7 and M. pocheonensis Gsoil 818 with values below the thresholds for species delineation. Strain 4Q3S-7 had LL-2,6-diaminopimelic acid as the diagnostic diamino acid in the cell wall. The major fatty acids (>10% of total fatty acids) were C10-methyl (TBSA), Cω9c, iso-Cand iso-C2-OH. The predominant menaquinone was MK-8(H). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylinositol and an unidentified phospholipid. The DNA G+C content of strain 4Q3S-7 was 72.0 mol% (draft genome sequence). Based on its phylogenetic, phenotypic and chemotaxonomic features, strain 4Q3S-7 is considered to represent a novel species of the genus Marmoricola, for which the name Marmoricola mangrovicus sp. nov. is proposed. The type strain is 4Q3S-7 (=KCTC 39790=CGMCC 4.7424). |
Keyword | Ani Ddh Endophytic Actinobacterium Genome Features Marmoricola Mangrovicus |
DOI | 10.1099/ijsem.0.003326 |
URL | View the original |
Indexed By | SCIE |
Language | 英語English |
WOS Research Area | Microbiology |
WOS Subject | Microbiology |
WOS ID | WOS:000467246300014 |
Scopus ID | 2-s2.0-85065757878 |
Fulltext Access | |
Citation statistics | |
Document Type | Journal article |
Collection | DEPARTMENT OF PHARMACEUTICAL SCIENCES Institute of Chinese Medical Sciences THE STATE KEY LABORATORY OF QUALITY RESEARCH IN CHINESE MEDICINE (UNIVERSITY OF MACAU) |
Corresponding Author | Sun,Cheng Hang |
Affiliation | 1.Institute of Medicinal Biotechnology,Chinese Academy of Medical Sciences,Peking Union Medical College,Beijing,100050,China 2.Research Center for Medicine and Biology,Zunyi Medical University,Zunyi,563003,China 3.State Key Laboratory of Quality Research,Chinese Medicine and Institute of Chinese Medical Sciences,University of Macau,Macao,Macao |
Recommended Citation GB/T 7714 | Li,Fei Na,Jiang,Zhong Ke,Liu,Shao Wei,et al. Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel[J]. International Journal of Systematic and Evolutionary Microbiology, 2019, 69(5), 1343-1349. |
APA | Li,Fei Na., Jiang,Zhong Ke., Liu,Shao Wei., Tuo,Li., Lee,Simon Ming Yuen., & Sun,Cheng Hang (2019). Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel. International Journal of Systematic and Evolutionary Microbiology, 69(5), 1343-1349. |
MLA | Li,Fei Na,et al."Marmoricola mangrovicus sp. nov., an endophytic actinobacterium isolated from Kandelia candel".International Journal of Systematic and Evolutionary Microbiology 69.5(2019):1343-1349. |
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