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The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights Journal article
Shao, Changwei, Sun, Shuai, Liu, Kaiqiang, Wang, Jiahao, Li, Shuo, Liu, Qun, Deagle, Bruce E., Seim, Inge, Biscontin, Alberto, Wang, Qian, Liu, Xin, Kawaguchi, So, Liu, Yalin, Jarman, Simon, Wang, Yue, Wang, Hong Yan, Huang, Guodong, Hu, Jiang, Feng, Bo, De Pittà, Cristiano, Liu, Shanshan, Wang, Rui, Ma, Kailong, Ying, Yiping, Sales, Gabrielle, Sun, Tao, Wang, Xinliang, Zhang, Yaolei, Zhao, Yunxia, Pan, Shanshan, Hao, Xiancai, Wang, Yang, Xu, Jiakun, Yue, Bowen, Sun, Yanxu, Zhang, He, Xu, Mengyang, Liu, Yuyan, Jia, Xiaodong, Zhu, Jiancheng, Liu, Shufang, Ruan, Jue, Zhang, Guojie, Yang, Huanming, Xu, Xun, Wang, Jun, Zhao, Xianyong, Meyer, Bettina, Fan, Guangyi. The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights[J]. Cell, 2023, 186(6), 1279-1294.e19.
Authors:  Shao, Changwei;  Sun, Shuai;  Liu, Kaiqiang;  Wang, Jiahao;  Li, Shuo; et al.
Favorite | TC[WOS]:34 TC[Scopus]:36  IF:45.5/49.0 | Submit date：2023/04/03
Antarctic Krill (Euphausia Superba)  Chromosome-level Genome  Circadian Clock  Environmental Adaptation  Giant Genome Size  Population Demography  Population Differentiation  Repeat Expansions  
A chromosome-level genome of Antechinus flavipes provides a reference for an Australian marsupial genus with male death after mating Journal article
Tian, Ran, Han, Kai, Geng, Yuepan, Yang, Chen, Shi, Chengcheng, Thomas, Patrick B., Pearce, Coral, Moffatt, Kate, Ma, Siming, Xu, Shixia, Yang, Guang, Zhou, Xuming, Gladyshev, Vadim N., Liu, Xin, Fisher, Diana O., Chopin, Lisa K., Leiner, Natália O., Baker, Andrew M., Fan, Guangyi, Seim, Inge. A chromosome-level genome of Antechinus flavipes provides a reference for an Australian marsupial genus with male death after mating[J]. Molecular Ecology Resources, 2022, 22(2), 740-754.
Authors:  Tian, Ran;  Han, Kai;  Geng, Yuepan;  Yang, Chen;  Shi, Chengcheng; et al.
Favorite | TC[WOS]:8 TC[Scopus]:8  IF:5.5/7.8 | Submit date：2022/03/04
Antechinus  Chromosome-level  Dasyurid  Genome Assembly  Semelparity  Suicidal Reproduction  
Comparative genomics provides insights into the aquatic adaptations of mammals Journal article
Yuan, Yuan, Zhang, Yaolei, Zhang, Peijun, Liu, Chang, Wang, Jiahao, Gao, Haiyu, Rus Hoelzel, A., Seim, Inge, Lv, Meiqi, Lin, Mingli, Dong, Lijun, Gao, Haoyang, Yang, Zixin, Caruso, Francesco, Lin, Wenzhi, Da Fonseca, Rute R., Wang, Ding, Wang, Xianyan, Rasmussen, Marianne H., Liu, Mingming, Zheng, Jinsong, Zhao, Liyuan, Campos, Paula F., Kang, Hui, Iversen, Maria, Song, Yue, Guo, Xinyu, Guo, Jiao, Qin, Yating, Pan, Shanshan, Xu, Qiwu, Meng, Lingfeng, Yunga, A., Liu, Shanshan, Ming-Yuen Lee, Simon, Liu, Xin, Xu, Xun, Yang, Huanming, Fan, Guangyi, Wang, Kun, Li, Songhai. Comparative genomics provides insights into the aquatic adaptations of mammals[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 118(37), e2106080118.
Authors:  Yuan, Yuan;  Zhang, Yaolei;  Zhang, Peijun;  Liu, Chang;  Wang, Jiahao; et al.
Favorite | TC[WOS]:58 TC[Scopus]:57  IF:9.4/10.8 | Submit date：2021/12/08
Aquatic Adaptation  Comparative Genomics  Marine Mammals  
A Chromosome-Level Genome of the Agile Gracile Mouse Opossum (Gracilinanus agilis) Journal article
Tian, Ran, Han, Kai, Geng, Yuepan, Yang, Chen, Guo, Han, Shi, Chengcheng, Xu, Shixia, Yang, Guang, Zhou, Xuming, Gladyshev, Vadim N., Liu, Xin, Chopin, Lisa K., Fisher, Diana O., Baker, Andrew M., Leiner, Natália O., Fan, Guangyi, Seim, Inge. A Chromosome-Level Genome of the Agile Gracile Mouse Opossum (Gracilinanus agilis)[J]. GENOME BIOLOGY AND EVOLUTION, 2021, 13(8), evab162.
Authors:  Tian, Ran;  Han, Kai;  Geng, Yuepan;  Yang, Chen;  Guo, Han; et al.
Favorite | TC[WOS]:3 TC[Scopus]:3  IF:3.2/3.2 | Submit date：2021/12/08
Gracilinanus  Chromosome-level  Genome  Mouse Opossum  South America  
An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species Journal article
Zhang,Peijun, Zhao,Yong, Li,Chang, Lin,Mingli, Dong,Lijun, Zhang,Rui, Liu,Mingzhong, Li,Kuan, Zhang,He, Liu,Xiaochuan, Zhang,Yaolei, Yuan,Yuan, Liu,Huan, Seim,Inge, Sun,Shuai, Du,Xiao, Chang,Yue, Li,Feida, Liu,Shanshan, Lee,Simon Ming Yuen, Wang,Kun, Wang,Ding, Wang,Xianyan, McGowen,Michael R., Jefferson,Thomas A., Olsen,Morten Tange, Stiller,Josefin, Zhang,Guojie, Xu,Xun, Yang,Huanming, Fan,Guangyi, Liu,Xin, Li,Songhai. An Indo-Pacific Humpback Dolphin Genome Reveals Insights into Chromosome Evolution and the Demography of a Vulnerable Species[J]. iScience, 2020, 23(10), 101640.
Authors:  Zhang,Peijun;  Zhao,Yong;  Li,Chang;  Lin,Mingli;  Dong,Lijun; et al.
Favorite | TC[WOS]:20 TC[Scopus]:24  IF:4.6/5.0 | Submit date：2021/03/01
Evolutionary Biology  Genetics  Genomics  
The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng Journal article
Fan, Guangyi, Liu, Xiaochuan, Sun, Shuai, Shi, Chengcheng, Du, Xiao, Han, Kai, Yang, Binrui, Fu, Yuanyuan, Liu, Minghua, Seim, Inge, Zhang, He, Xu, Qiwu, Wang, Jiahao, Su, Xiaoshan, Shao, Libin, Zhu, Yuanfang, Shao, Yunchang, Zhao, Yunpeng, Wong, Andrew KC, Zhuang, Dennis, Chen, Wenbin, Zhang, Gengyun, Yang, Huanming, Xu, Xun, Tsui, Stephen Kwok Wing, Liu, Xin, Lee, Simon Ming Yue. The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng[J]. iScience, 2020, 23(9), 101538.
Authors:  Fan, Guangyi;  Liu, Xiaochuan;  Sun, Shuai;  Shi, Chengcheng;  Du, Xiao; et al.
Favorite | TC[WOS]:33 TC[Scopus]:35  IF:4.6/5.0 | Submit date：2021/12/06
Complete Chloroplast Genomes of 14 Mangroves: Phylogenetic and Comparative Genomic Analyses Journal article
Shi,Chengcheng, Han,Kai, Li,Liangwei, Seim,Inge, Lee,Simon Ming Yuen, Xu,Xun, Yang,Huanming, Fan,Guangyi, Liu,Xin. Complete Chloroplast Genomes of 14 Mangroves: Phylogenetic and Comparative Genomic Analyses[J]. Biomed Research International, 2020, 2020, 8731857.
Authors:  Shi,Chengcheng;  Han,Kai;  Li,Liangwei;  Seim,Inge;  Lee,Simon Ming Yuen; et al.
Favorite | TC[WOS]:15 TC[Scopus]:16  IF:2.6/3.1 | Submit date：2021/03/01
A chromosome‐level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth Journal article
Yan He, Yue Chang, Lisui Bao, Mengjun Yu, Rui Li, Jingjing Niu, Guangyi Fan, Weihao Song, Inge Seim, Yating Qin, Xuemei Li, Jinxiang Liu, Xiangfu Kong, Meiting Peng, Minmin Sun, Mengya Wang, Jiangbo Qu, Xuangang Wang, Xiaobing Liu, Xiaolong Wu, Xi Zhao, Xuliang Wang, Yaolei Zhang, Jiao Guo, Yang Liu, Kaiqiang Liu, Yilin Wang, He Zhang, Longqi Liu, Mingyue Wang, Haiyang Yu, Xubo Wang, Jie Cheng, Zhigang Wang, Xun Xu, Jian Wang, Huanming Yang, Simon Ming‐Yuen Lee, Xin Liu, Quanqi Zhang, Jie Qi. A chromosome‐level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth[J]. MOLECULAR ECOLOGY RESOURCES, 2019, 19(5).
Authors:  Yan He;  Yue Chang;  Lisui Bao;  Mengjun Yu;  Rui Li; et al.
Favorite | TC[WOS]:48 TC[Scopus]:51  IF:5.5/7.8 | Submit date：2020/01/16
Astacin Metalloproteinase  Atac‐seq  Evolution  Rockfish Genome  Viviparity  Zona Pellucida