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Identification of Anticancer Peptides from the Genome of Candida albicans: in Silico Screening, in Vitro and in Vivo Validations Journal article
Cheong, Hong Hin, Zuo, Weimin, Chen, Jiarui, Un, Chon Wai, Si, Yain Whar, Wong, Koon Ho, Kwok, Hang Fai, Siu, Shirley W.I.. Identification of Anticancer Peptides from the Genome of Candida albicans: in Silico Screening, in Vitro and in Vivo Validations[J]. Journal of Chemical Information and Modeling, 2024, 64(15), 6174-6189.
Authors:  Cheong, Hong Hin;  Zuo, Weimin;  Chen, Jiarui;  Un, Chon Wai;  Si, Yain Whar; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:5.6/5.9 | Submit date：2024/08/05
A deep learning method for predicting the minimum inhibitory concentration of antimicrobial peptides against Escherichia coli using Multi-Branch-CNN and Attention Review article
2023
Authors:  Yan, Jielu;  Zhang, Bob;  Zhou, Mingliang;  Campbell-Valois, François Xavier;  Siu, Shirley W.I.
Favorite | TC[WOS]:3 TC[Scopus]:5  IF:5.0/6.1 | Submit date：2024/01/02
Antimicrobial Peptides  Deep Learning  Drug Discovery  Minimum Inhibitory Concentrations  Regression  
Discovery and analysis of a novel antimicrobial peptide B1AW from the skin secretion of Amolops wuyiensis and improving the membrane-binding affinity through the construction of the lysine-introduced analogue Journal article
Qin,Haixin, Zuo,Weimin, Ge,Lilin, Siu,Shirley W.I., Wang,Lei, Chen,Xiaoling, Ma,Chengbang, Chen,Tianbao, Zhou,Mei, Cao,Zhijian, Kwok,Hang Fai. Discovery and analysis of a novel antimicrobial peptide B1AW from the skin secretion of Amolops wuyiensis and improving the membrane-binding affinity through the construction of the lysine-introduced analogue[J]. Computational and Structural Biotechnology Journal, 2023, 21, 2960-2972.
Authors:  Qin,Haixin;  Zuo,Weimin;  Ge,Lilin;  Siu,Shirley W.I.;  Wang,Lei; et al.
Favorite | TC[WOS]:5 TC[Scopus]:5  IF:4.4/5.0 | Submit date：2023/08/03
Anticancer Peptide  Antimicrobial Peptide  Brevinin Peptide  Molecular Dynamic Simulation  Peptide Modification  
Attentive recurrent adversarial domain adaptation with Top-k pseudo-labeling for time series classification Journal article
Qi-Qiao He, Shirley Weng In Siu, Yain-Whar Si. Attentive recurrent adversarial domain adaptation with Top-k pseudo-labeling for time series classification[J]. APPLIED INTELLIGENCE, 2022, 53(11), 13110-13129.
Authors:  Qi-Qiao He;  Shirley Weng In Siu;  Yain-Whar Si
Favorite | TC[WOS]:4 TC[Scopus]:3  IF:3.4/3.9 | Submit date：2022/12/28
Domain Adaptation  Adversarial Training  Time Series Classification  Attentive  Pseudo-labeling  
Recent Progress in the Discovery and Design of Antimicrobial Peptides Using Traditional Machine Learning and Deep Learning Journal article
Yan, Jielu, Cai, Jianxiu, Zhang, Bob, Wang, Yapeng, Wong, Derek F., Siu, Shirley W.I.. Recent Progress in the Discovery and Design of Antimicrobial Peptides Using Traditional Machine Learning and Deep Learning[J]. Antibiotics-Basel, 2022, 11(10), 1451.
Authors:  Yan, Jielu;  Cai, Jianxiu;  Zhang, Bob;  Wang, Yapeng;  Wong, Derek F.; et al.
Favorite | TC[WOS]:37 TC[Scopus]:41  IF:4.3/4.6 | Submit date：2022/11/07
Antimicrobial Peptide  Machine Learning  Deep Learning  Classification  Regression  Therapeutic Peptide  Medicine  
Multi-Branch-CNN: Classification of ion channel interacting peptides using multi-branch convolutional neural network Journal article
Yan, Jielu, Zhang, Bob, Zhou, Mingliang, Kwok, Hang Fai, Siu, Shirley W.I.. Multi-Branch-CNN: Classification of ion channel interacting peptides using multi-branch convolutional neural network[J]. Computers in Biology and Medicine, 2022, 147, 105717.
Authors:  Yan, Jielu;  Zhang, Bob;  Zhou, Mingliang;  Kwok, Hang Fai;  Siu, Shirley W.I.
Favorite | TC[WOS]:13 TC[Scopus]:14  IF:7.0/6.7 | Submit date：2022/08/01
Classification  Deep Learning  Drug Discovery  Ion Channel  Multi-branch-cnn  Peptides  
Instance-based deep transfer learning with attention for stock movement prediction Journal article
He, Qi-Qiao, Siu, Shirley Weng In, Si, Yain-Whar. Instance-based deep transfer learning with attention for stock movement prediction[J]. APPLIED INTELLIGENCE, 2022, 53(6), 6887–6908.
Authors:  He, Qi-Qiao;  Siu, Shirley Weng In;  Si, Yain-Whar
Favorite | TC[WOS]:8 TC[Scopus]:9  IF:3.4/3.9 | Submit date：2022/07/24
Instance-based  Deep Transfer Learning  Stock Movement Prediction  Attention Mechanism  
A Neuropeptide Y/F-like Polypeptide Derived from the Transcriptome of Turbinaria peltata Suppresses LPS-Induced Astrocytic Inflammation Review article
2022
Authors:  Chen, Qian;  Liang, Zirong;  Yue, Qian;  Wang, Xiufen;  Siu, Shirley Weng In; et al.
Favorite | TC[WOS]:6 TC[Scopus]:6  IF:3.3/3.9 | Submit date：2022/08/02
Anti-epileptic Kunitz-like peptides discovered in the branching coral Acropora digitifera through transcriptomic analysis Journal article
Chen, Hanbin, Siu, Shirley Weng In, Wong, Clarence Tsun Ting, Qiu, Jianwen, Cheung, Alex Kwok Kuen, Lee, Simon Ming Yuen. Anti-epileptic Kunitz-like peptides discovered in the branching coral Acropora digitifera through transcriptomic analysis[J]. Archives of Toxicology, 2022, 96(9), 2589-2608.
Authors:  Chen, Hanbin;  Siu, Shirley Weng In;  Wong, Clarence Tsun Ting;  Qiu, Jianwen;  Cheung, Alex Kwok Kuen; et al.
Favorite | TC[WOS]:2 TC[Scopus]:2  IF:4.8/5.3 | Submit date：2022/08/05
Anti-epileptic  Gabaa  Kunitz Peptide  Transcriptome  
Chemical toxicity prediction based on semi-supervised learning and graph convolutional neural network Journal article
Chen, Jiarui, Si, Yain Whar, Un, Chon Wai, Siu, Shirley W.I.. Chemical toxicity prediction based on semi-supervised learning and graph convolutional neural network[J]. Journal of Cheminformatics, 2021, 13(1).
Authors:  Chen, Jiarui;  Si, Yain Whar;  Un, Chon Wai;  Siu, Shirley W.I.
Favorite | TC[WOS]:30 TC[Scopus]:37  IF:7.1/9.3 | Submit date：2021/12/08
Admet  Chemical Toxicity  Deep Learning  Graph Convolutional Neural Network  Mean Teacher  Semi-supervised Learning  Tox21