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The bioinformatics toolbox for circRNA discovery and analysis Review article
2021
Authors:  Chen, Liang;  Wang, Changliang;  Sun, Huiyan;  Wang, Juexin;  Liang, Yanchun; et al.
Favorite | TC[WOS]:226 TC[Scopus]:225  IF:6.8/7.9 | Submit date：2021/12/07
Bioinformatics Tools  Circrna  Disease Biomarker  Next Generation Sequencing  Non-coding Rna  Text Mining  
TFmapper: A Tool for Searching Putative Factors Regulating Gene Expression Using ChIP-seq Data Journal article
Zeng J., Li G.. TFmapper: A Tool for Searching Putative Factors Regulating Gene Expression Using ChIP-seq Data[J]. International journal of biological sciences, 2018, 14(12), 1724-1731.
Authors:  Zeng J.;  Li G.
Favorite | TC[WOS]:8 TC[Scopus]:8 | Submit date：2019/01/15
Chromatin Immunoprecipitation  Next-generation Sequencing  Regulation Of Gene Expression  
The high-quality genome of Brassica napus cultivar ‘ZS11’ reveals the introgression history in semi-winter morphotype Journal article
Sun F., Fan G., Hu Q., Zhou Y., Guan M., Tong C., Li J., Du D., Qi C., Jiang L., Liu W., Huang S., Chen W., Yu J., Mei D., Meng J., Zeng P., Shi J., Liu K., Wang X., Wang X., Long Y., Liang X., Hu Z., Huang G., Dong C., Zhang H., Li J., Zhang Y., Li L., Shi C., Wang J., Simon Ming-Yuen Lee, Guan C., Xu X., Liu S., Liu X., Chalhoub B., Hua W., Wang H.. The high-quality genome of Brassica napus cultivar ‘ZS11’ reveals the introgression history in semi-winter morphotype[J]. Plant Journal, 2017, 92(3), 452-468.
Authors:  Sun F.;  Fan G.;  Hu Q.;  Zhou Y.;  Guan M.; et al.
Favorite | TC[WOS]:197 TC[Scopus]:215 | Submit date：2018/11/06
Allotetraploid  Brassica Napus  Genome  Homoeolog  Introgression  Next-generation Sequencing Technologies  Polyploid  Subgenome  Zs11  
RNA-Seq Reveals Acute Manganese Exposure Increases Endoplasmic Reticulum Related and Lipocalin mRNAs in Caenorhabditis elegans Journal article
Rudgalvyte M., Peltonen J., Lakso M., Nass R., Wong G.. RNA-Seq Reveals Acute Manganese Exposure Increases Endoplasmic Reticulum Related and Lipocalin mRNAs in Caenorhabditis elegans[J]. Journal of Biochemical and Molecular Toxicology, 2016, 30(2), 97-105.
Authors:  Rudgalvyte M.;  Peltonen J.;  Lakso M.;  Nass R.;  Wong G.
Favorite | TC[WOS]:9 TC[Scopus]:13 | Submit date：2018/12/18
Heavy Metal  Model Organism  Next-generation Sequencing  Rnai  Transcriptomics  
CRISPR/Cas9-AAV Mediated Knock-in at NRL Locus in Human Embryonic Stem Cells Journal article
Xianglian Ge, Haitao Xi, Fayu Yang, Xiao Zhi, Yanghua Fu, Ding Chen, Ren-He Xu, Ge Lin, Jia Qu, Junzhao Zhao, Feng Gu. CRISPR/Cas9-AAV Mediated Knock-in at NRL Locus in Human Embryonic Stem Cells[J]. Molecular Therapy - Nucleic Acids, 2016, 5, E393.
Authors:  Xianglian Ge;  Haitao Xi;  Fayu Yang;  Xiao Zhi;  Yanghua Fu; et al.
Favorite | TC[WOS]:8 TC[Scopus]:9  IF:6.5/6.7 | Submit date：2018/12/20
Aav  Crispr/cas9  Homologous Recombination  Human Embryonic Stem Cells  Next Generation Sequencing  Nrl  
An effective analytic method for detecting tissue-specific genes in RNA-seq experiments Journal article
Zhao G., Li Q., Wang I.-M., Liu X., Fang X., Zhang X.D.. An effective analytic method for detecting tissue-specific genes in RNA-seq experiments[J]. Pharmacogenomics, 2015, 16(16), 1769-1779.
Authors:  Zhao G.;  Li Q.;  Wang I.-M.;  Liu X.;  Fang X.; et al.
Favorite | TC[WOS]:2 TC[Scopus]:2 | Submit date：2019/01/03
Consecutive Procedures  Generalization Of Tukey's Test  Next-generation Sequencing  Rna-seq  Tissue-specific Gene  
Considerations for Comprehensive Assessment of Genetic Predisposition in Familial Breast Cancer Journal article
Wang, S. M.. Considerations for Comprehensive Assessment of Genetic Predisposition in Familial Breast Cancer[J]. The Breast Journal, 2014, 67-75.
Authors:  Wang, S. M.
Favorite | TC[WOS]:7 TC[Scopus]:7 | Submit date：2022/07/27
Hereditary Breast Cancer  Predisposition  Screening  Next Generation Sequencing  
Methylmercury exposure increases lipocalin related (lpr) and decreases activated in blocked unfolded protein response (abu) genes and specific mirnas in caenorhabditis elegans Journal article
Rudgalvyte M., VanDuyn N., Aarnio V., Heikkinen L., Peltonen J., Lakso M., Nass R., Wong G.. Methylmercury exposure increases lipocalin related (lpr) and decreases activated in blocked unfolded protein response (abu) genes and specific mirnas in caenorhabditis elegans[J]. Toxicology Letters, 2013, 222(2), 189-196.
Authors:  Rudgalvyte M.;  VanDuyn N.;  Aarnio V.;  Heikkinen L.;  Peltonen J.; et al.
Favorite | TC[WOS]:19 TC[Scopus]:22 | Submit date：2018/12/18
Blocked Unfolded Protein Response  Er Stress  Heavy Metal  Next-generation Sequencing  Oxidative Stress  
Multiplex Illumina sequencing using DNA barcoding Journal article
Wong K.H., Jin Y., Moqtaderi Z.. Multiplex Illumina sequencing using DNA barcoding[J]. Current Protocols in Molecular Biology, 2013(SUPPL.101).
Authors:  Wong K.H.;  Jin Y.;  Moqtaderi Z.
Favorite | TC[Scopus]:54 | Submit date：2019/01/16
Barcoding  Chip-seq  Deep Sequencing  Multiplexing  Next-generation Sequencing  
Identification of medium-sized genomic deletions with low coverage, mate-paired restricted tags Journal article
Wang, S. M.. Identification of medium-sized genomic deletions with low coverage, mate-paired restricted tags[J]. BMC Genomics, 2013, 51-60.
Authors:  Wang, S. M.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:3.5/4.1 | Submit date：2022/07/27
Medium-sized Deletion  Restriction Enzymes  Next Generation Sequencing  Structural Variation