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Pathogenic variants in human DNA damage repair genes mostly arose in recent human history Journal article
Zhao, Bojin, Li, Jiaheng, Sinha, Siddharth, Qin, Zixin, Kou, Si Hoi, Xiao, Fengxia, Lei, Huijun, Chen, Tianhui, Cao, Wenming, Ding, Xiaofan, Wang, San Ming. Pathogenic variants in human DNA damage repair genes mostly arose in recent human history[J]. BMC Cancer, 2024, 24(1), 415.
Authors:  Zhao, Bojin;  Li, Jiaheng;  Sinha, Siddharth;  Qin, Zixin;  Kou, Si Hoi; et al.
Favorite | TC[WOS]:3 TC[Scopus]:3  IF:3.4/3.8 | Submit date：2024/05/16
Archaeological  Dna Damage Repair  Evolutionary Origin  Pathogenic Variants  Phylogenetic  
Comprehensive classification of TP53 somatic missense variants based on their impact on p53 structural stability Journal article
Benjamin Tam, Philip Naderev P. Lagniton, Mariano da Luz, Bojin Zhao, Siddharth Sinha, Chon Lok Lei, San Ming Wang. Comprehensive classification of TP53 somatic missense variants based on their impact on p53 structural stability[J]. Briefings in Bioinformatics, 2024, 25(5), bbae400.
Authors:  Benjamin Tam;  Philip Naderev P. Lagniton;  Mariano da Luz;  Bojin Zhao;  Siddharth Sinha; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:6.8/7.9 | Submit date：2024/08/07
Ramachandran Plot  Molecular Dynamics Simulations  Tp53  Somatic Missense Variants  
Pathogenic variants in human DNA damage repair genes mostly arose after the latest human out-of-Africa migration Journal article
He, Jun, Kou, Si Hoi, Li, Jiaheng, Ding, Xiaofan, Wang, San Ming. Pathogenic variants in human DNA damage repair genes mostly arose after the latest human out-of-Africa migration[J]. Frontiers in Genetics, 2024, 15, 1408952.
Authors:  He, Jun;  Kou, Si Hoi;  Li, Jiaheng;  Ding, Xiaofan;  Wang, San Ming
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:2.8/3.3 | Submit date：2024/08/05
Brca  Ddr Genes  Evolution Origin  Pathogenic Variants  Tp53  
Using Portuguese BRCA pathogenic variation as a model to study the impact of human admixture on human health Journal article
Andaluz, Stephanie, Zhao, Bojin, Sinha, Siddharth, Lagniton, Philip Naderev Panuringan, Costa, Diogo Alpuim, Ding, Xiaofan, Brito, Miguel, Wang, San Ming. Using Portuguese BRCA pathogenic variation as a model to study the impact of human admixture on human health[J]. BMC Genomics, 2024, 25(1), 416.
Authors:  Andaluz, Stephanie;  Zhao, Bojin;  Sinha, Siddharth;  Lagniton, Philip Naderev Panuringan;  Costa, Diogo Alpuim; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:3.5/4.1 | Submit date：2024/05/16
Admixture  Brca1  Brca2  Pathogenic Variants  Cancer Risk  Portuguese  Brazilian  
Evolutionary origin of germline pathogenic variants in human DNA mismatch repair genes Journal article
Lei, Huijun, Li, Jiaheng, Zhao, Bojin, Kou, Si Hoi, Xiao, Fengxia, Chen, Tianhui, Wang, San Ming. Evolutionary origin of germline pathogenic variants in human DNA mismatch repair genes[J]. Human Genomics, 2024, 18(1), 5.
Authors:  Lei, Huijun;  Li, Jiaheng;  Zhao, Bojin;  Kou, Si Hoi;  Xiao, Fengxia; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:3.8/4.0 | Submit date：2024/05/16
Ancient Genome  Conservation  Dna Mismatch Repair  Evolutionary Origin  Pathogenic Variant  
Classification of MLH1 Missense VUS Using Protein Structure-Based Deep Learning-Ramachandran Plot-Molecular Dynamics Simulations Method Journal article
Tam, Benjamin, Qin, Zixin, Zhao, Bojin, Sinha, Siddharth, Lei, Chon Lok, Wang, San Ming. Classification of MLH1 Missense VUS Using Protein Structure-Based Deep Learning-Ramachandran Plot-Molecular Dynamics Simulations Method[J]. International Journal of Molecular Sciences, 2024, 25(2), 850.
Authors:  Tam, Benjamin;  Qin, Zixin;  Zhao, Bojin;  Sinha, Siddharth;  Lei, Chon Lok; et al.
Favorite | TC[WOS]:3 TC[Scopus]:3  IF:4.9/5.6 | Submit date：2024/02/22
Autoencoder  Deep Learning  Mlh1  Molecular Dynamics Simulation  Neural Network  Ramachandran Plot  Vus  
Pancreatic cancer cluster region identified in BRCA2 Journal article
Chian,Jia Sheng, Xu,Wenzheng, Wang,San Ming. Pancreatic cancer cluster region identified in BRCA2[J]. Journal of Medical Genetics, 2023, 60(11), 1052-1056.
Authors:  Chian,Jia Sheng;  Xu,Wenzheng;  Wang,San Ming
Favorite | TC[WOS]:2 TC[Scopus]:2  IF:3.5/4.1 | Submit date：2023/08/03
Pancreatic Diseases  
Classification of PTEN missense VUS through exascale simulations Journal article
Sinha, Siddharth, Li, Jiaheng, Tam, Benjamin, Wang, San Ming. Classification of PTEN missense VUS through exascale simulations[J]. Briefings in Bioinformatics, 2023, 24(6), bbad361.
Authors:  Sinha, Siddharth;  Li, Jiaheng;  Tam, Benjamin;  Wang, San Ming
Favorite | TC[WOS]:1 TC[Scopus]:1  IF:6.8/7.9 | Submit date：2023/12/04
Evolution Selection  Lipid Phosphatase Activity  Md Simulations  Pten  Replica Exchange Molecular Dynamics (Remd) Simulations  Variants Of Uncertain Significance (Vus)  
Evolutionary Origin of Human PALB2 Germline Pathogenic Variants Journal article
Chian, Jia Sheng, Li, Jiaheng, Wang, San Ming. Evolutionary Origin of Human PALB2 Germline Pathogenic Variants[J]. International Journal of Molecular Sciences, 2023, 24(14).
Authors:  Chian, Jia Sheng;  Li, Jiaheng;  Wang, San Ming
Favorite | TC[WOS]:3 TC[Scopus]:3  IF:4.9/5.6 | Submit date：2023/09/25
Evolutionary Origin  Palb2  Paleoanthropology  Phylogenetic  
TP53 germline pathogenic variants in modern humans were likely originated during recent human history Journal article
Si Hoi Kou, Jiaheng Li, Benjamin Tam,, Huijun Lei, Bojin Zhao, Fengxia Xiao, San Ming Wang. TP53 germline pathogenic variants in modern humans were likely originated during recent human history[J]. NAR Cancer, 2023, 5(3), zcad025.
Authors:  Si Hoi Kou;  Jiaheng Li;  Benjamin Tam,;  Huijun Lei;  Bojin Zhao; et al.
Favorite | TC[WOS]:7 TC[Scopus]:7  IF:3.4/4.1 | Submit date：2023/08/03